2.50
Hdl Handle:
http://hdl.handle.net/10033/226835
Title:
Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207).
Authors:
Labutti, Kurt; Mayilraj, Shanmugam; Clum, Alicia; Lucas, Susan; Glavina Del Rio, Tijana; Nolan, Matt; Tice, Hope; Cheng, Jan-Fang; Pitluck, Sam; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Goodwin, Lynne; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D; Rohde, Manfred; Spring, Stefan; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C; Klenk, Hans-Peter; Lapidus, Alla
Abstract:
Dethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thiosulfate-reducing bacterium utilizes peptides and amino acids, but neither sugars nor fatty acids. It was isolated from an offshore oil well where it was been reported to be involved in pitting corrosion of mild steel. Initially, this bacterium was described as a distant relative of the genus Thermoanaerobacter, but was not assigned to a genus, it was subsequently placed into the novel phylum Synergistetes. A large number of repeats in the genome sequence prevented an economically justifiable closure of the last gaps. This is only the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Citation:
Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207). 2010, 3 (1):85-92 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
2010
URI:
http://hdl.handle.net/10033/226835
DOI:
10.4056/sigs.1092865
PubMed ID:
21304695
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
Publications of Dept. Medizinische Mikrobiologie (MMIK)

Full metadata record

DC FieldValue Language
dc.contributor.authorLabutti, Kurten_GB
dc.contributor.authorMayilraj, Shanmugamen_GB
dc.contributor.authorClum, Aliciaen_GB
dc.contributor.authorLucas, Susanen_GB
dc.contributor.authorGlavina Del Rio, Tijanaen_GB
dc.contributor.authorNolan, Matten_GB
dc.contributor.authorTice, Hopeen_GB
dc.contributor.authorCheng, Jan-Fangen_GB
dc.contributor.authorPitluck, Samen_GB
dc.contributor.authorLiolios, Konstantinosen_GB
dc.contributor.authorIvanova, Nataliaen_GB
dc.contributor.authorMavromatis, Konstantinosen_GB
dc.contributor.authorMikhailova, Nataliaen_GB
dc.contributor.authorPati, Amritaen_GB
dc.contributor.authorGoodwin, Lynneen_GB
dc.contributor.authorChen, Amyen_GB
dc.contributor.authorPalaniappan, Krishnaen_GB
dc.contributor.authorLand, Miriamen_GB
dc.contributor.authorHauser, Lorenen_GB
dc.contributor.authorChang, Yun-Juanen_GB
dc.contributor.authorJeffries, Cynthia Den_GB
dc.contributor.authorRohde, Manfreden_GB
dc.contributor.authorSpring, Stefanen_GB
dc.contributor.authorGöker, Markusen_GB
dc.contributor.authorWoyke, Tanjaen_GB
dc.contributor.authorBristow, Jamesen_GB
dc.contributor.authorEisen, Jonathan Aen_GB
dc.contributor.authorMarkowitz, Victoren_GB
dc.contributor.authorHugenholtz, Philipen_GB
dc.contributor.authorKyrpides, Nikos Cen_GB
dc.contributor.authorKlenk, Hans-Peteren_GB
dc.contributor.authorLapidus, Allaen_GB
dc.date.accessioned2012-05-31T10:32:46Z-
dc.date.available2012-05-31T10:32:46Z-
dc.date.issued2010-
dc.identifier.citationPermanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207). 2010, 3 (1):85-92 Stand Genomic Scien_GB
dc.identifier.issn1944-3277-
dc.identifier.pmid21304695-
dc.identifier.doi10.4056/sigs.1092865-
dc.identifier.urihttp://hdl.handle.net/10033/226835-
dc.description.abstractDethiosulfovibrio peptidovorans Magot et al. 1997 is the type species of the genus Dethiosulfovibrio of the family Synergistaceae in the recently created phylum Synergistetes. The strictly anaerobic, vibriod, thiosulfate-reducing bacterium utilizes peptides and amino acids, but neither sugars nor fatty acids. It was isolated from an offshore oil well where it was been reported to be involved in pitting corrosion of mild steel. Initially, this bacterium was described as a distant relative of the genus Thermoanaerobacter, but was not assigned to a genus, it was subsequently placed into the novel phylum Synergistetes. A large number of repeats in the genome sequence prevented an economically justifiable closure of the last gaps. This is only the third published genome from a member of the phylum Synergistetes. The 2,576,359 bp long genome consists of three contigs with 2,458 protein-coding and 59 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.en_GB
dc.language.isoenen
dc.rightsArchived with thanks to Standards in genomic sciencesen_GB
dc.titlePermanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207).en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen_GB

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