2.50
Hdl Handle:
http://hdl.handle.net/10033/235775
Title:
Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)).
Authors:
Lapidus, Alla; Nolan, Matt; Lucas, Susan; Glavina Del Rio, Tijana; Tice, Hope; Cheng, Jan-Fang; Tapia, Roxanne; Han, Cliff; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Huntemann, Marcel; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Brambilla, Evelyne-Marie; Rohde, Manfred; Abt, Birte; Verbarg, Susanne; Göker, Markus; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C; Klenk, Hans-Peter; Woyke, Tanja
Abstract:
Thiothrix nivea (Rabenhorst 1865) Winogradsky 1888 (Approved Lists 1980) emend. Larkin and Shinabarger 1983 is the type species of the genus Thiothrix in the family Thiotrichaceae. The species is of interest not only because of its isolated location in the yet to be genomically characterized region of the tree of life, but also because of its life-style with gliding gonidia, the multilayer sheath, rosettes, and the embedded sulfur granules. Strain JP2(T) is the neotype strain of the species which was first observed by Rabenhorst in 1865 and later reclassified by Winogradsky in 1888 into the then novel genus Thiothrix. This is the first completed (improved-high-quality-draft) genome sequence to be published of a member of the family Thiotrichaceae. The genome in its current assembly consists of 15 contigs in four scaffolds with a total of 4,691,711 bp bearing 4,542 protein-coding and 52 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Citation:
Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)). 2011, 5 (3):398-406 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
31-Dec-2011
URI:
http://hdl.handle.net/10033/235775
DOI:
10.4056/sigs.2344929
PubMed ID:
22675589
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
Publications of Dept. Medizinische Mikrobiologie (MMIK)

Full metadata record

DC FieldValue Language
dc.contributor.authorLapidus, Allaen_GB
dc.contributor.authorNolan, Matten_GB
dc.contributor.authorLucas, Susanen_GB
dc.contributor.authorGlavina Del Rio, Tijanaen_GB
dc.contributor.authorTice, Hopeen_GB
dc.contributor.authorCheng, Jan-Fangen_GB
dc.contributor.authorTapia, Roxanneen_GB
dc.contributor.authorHan, Cliffen_GB
dc.contributor.authorGoodwin, Lynneen_GB
dc.contributor.authorPitluck, Samen_GB
dc.contributor.authorLiolios, Konstantinosen_GB
dc.contributor.authorPagani, Ioannaen_GB
dc.contributor.authorIvanova, Nataliaen_GB
dc.contributor.authorHuntemann, Marcelen_GB
dc.contributor.authorMavromatis, Konstantinosen_GB
dc.contributor.authorMikhailova, Nataliaen_GB
dc.contributor.authorPati, Amritaen_GB
dc.contributor.authorChen, Amyen_GB
dc.contributor.authorPalaniappan, Krishnaen_GB
dc.contributor.authorLand, Miriamen_GB
dc.contributor.authorBrambilla, Evelyne-Marieen_GB
dc.contributor.authorRohde, Manfreden_GB
dc.contributor.authorAbt, Birteen_GB
dc.contributor.authorVerbarg, Susanneen_GB
dc.contributor.authorGöker, Markusen_GB
dc.contributor.authorBristow, Jamesen_GB
dc.contributor.authorEisen, Jonathan Aen_GB
dc.contributor.authorMarkowitz, Victoren_GB
dc.contributor.authorHugenholtz, Philipen_GB
dc.contributor.authorKyrpides, Nikos Cen_GB
dc.contributor.authorKlenk, Hans-Peteren_GB
dc.contributor.authorWoyke, Tanjaen_GB
dc.date.accessioned2012-07-25T14:52:28Z-
dc.date.available2012-07-25T14:52:28Z-
dc.date.issued2011-12-31-
dc.identifier.citationGenome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)). 2011, 5 (3):398-406 Stand Genomic Scien_GB
dc.identifier.issn1944-3277-
dc.identifier.pmid22675589-
dc.identifier.doi10.4056/sigs.2344929-
dc.identifier.urihttp://hdl.handle.net/10033/235775-
dc.description.abstractThiothrix nivea (Rabenhorst 1865) Winogradsky 1888 (Approved Lists 1980) emend. Larkin and Shinabarger 1983 is the type species of the genus Thiothrix in the family Thiotrichaceae. The species is of interest not only because of its isolated location in the yet to be genomically characterized region of the tree of life, but also because of its life-style with gliding gonidia, the multilayer sheath, rosettes, and the embedded sulfur granules. Strain JP2(T) is the neotype strain of the species which was first observed by Rabenhorst in 1865 and later reclassified by Winogradsky in 1888 into the then novel genus Thiothrix. This is the first completed (improved-high-quality-draft) genome sequence to be published of a member of the family Thiotrichaceae. The genome in its current assembly consists of 15 contigs in four scaffolds with a total of 4,691,711 bp bearing 4,542 protein-coding and 52 RNA genes and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.en_GB
dc.language.isoenen
dc.rightsArchived with thanks to Standards in genomic sciencesen_GB
dc.titleGenome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)).en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen_GB

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