|
|
Helmholtz Zentrum für Infektionsforschung Repository >
Further Departments and Research Groups >
Dept. of Experimental Mouse Genetics (EMG) >
JRG Infection Genetics (INFG) >
Publications of JRG Infection Genetics (INFG) >
Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)).
Please use
this identifier to cite or link
to this item:
http://hdl.handle.net/10033/239474
Del.icio.us
LinkedIn
Citeulike
Connotea
Facebook
Stumble it!
| Title: | Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)). |
| Authors: | Anderson, Iain Held, Brittany Lapidus, Alla Nolan, Matt Lucas, Susan Tice, Hope Del Rio, Tijana Glavina Cheng, Jan-Fang Han, Cliff Tapia, Roxanne Goodwin, Lynne A Pitluck, Sam Liolios, Konstantinos Mavromatis, Konstantinos Pagani, Ioanna Ivanova, Natalia Mikhailova, Natalia Pati, Amrita Chen, Amy Palaniappan, Krishna Land, Miriam Brambilla, Evelyne-Marie Rohde, Manfred Spring, Stefan Göker, Markus Detter, John C Woyke, Tanja Bristow, James Eisen, Jonathan A Markowitz, Victor Hugenholtz, Philip Klenk, Hans-Peter Kyrpides, Nikos C |
| Citation: | Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)). 2012, 6 (2):174-84 Stand Genomic Sci |
| Journal: | Standards in genomic sciences |
| Issue Date: | 25-May-2012 |
| URI: | http://hdl.handle.net/10033/239474 |
| DOI: | 10.4056/sigs.2746047 |
| PubMed ID: | 22768361 |
| Abstract: | Holophaga foetida Liesack et al. 1995 is a member of the phylum Acidobacteria and is of interest for its ability to anaerobically degrade aromatic compounds and for its production of volatile sulfur compounds through a unique pathway. The genome of H. foetida strain TMBS4(T) is the first to be sequenced for a representative of the class Holophagae. Here we describe the features of this organism, together with the complete genome sequence (improved high quality draft), and annotation. The 4,127,237 bp long chromosome with its 3,615 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
| Type: | Article |
| Language: | en |
| ISSN: | 1944-3277 |
| Appears in Collections: | Publications of JRG Infection Genetics (INFG)
|
| Files in This Item: |
| File |
Description |
Size |
Format |
View/Open |
| Anderson et al_final.pdf | Open Access publication | 1657Kb | Adobe PDF |  View/Open |
|
| Related articles on PubMed |  | Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10).Lapidus A, Pukall R, Labuttii K, Copeland A, Del Rio TG, Nolan M, Chen F, Lucas S, Tice H, Cheng JF, Bruce D, Goodwin L, Pitluck S, Rohde M, Göker M, Pati A, Ivanova N, Mavrommatis K, Chen A, Palaniappan K, D'haeseleer P, Chain P, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP 2009 Jul 20 |
|  | Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812(T)).Anderson I, Saunders E, Lapidus A, Nolan M, Lucas S, Tice H, Del Rio TG, Cheng JF, Han C, Tapia R, Goodwin LA, Pitluck S, Liolios K, Mavromatis K, Pagani I, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Jeffries CD, Chang YJ, Brambilla EM, Rohde M, Spring S, Göker M, Detter JC, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP 2012 May 25 |
|  | Complete genome sequence of Leadbetterella byssophila type strain (4M15).Abt B, Teshima H, Lucas S, Lapidus A, Del Rio TG, Nolan M, Tice H, Cheng JF, Pitluck S, Liolios K, Pagani I, Ivanova N, Mavromatis K, Pati A, Tapia R, Han C, Goodwin L, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Göker M, Tindall BJ, Detter JC, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC 2011 Mar 4 |
|  | Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883).Chovatia M, Sikorski J, Schröder M, Lapidus A, Nolan M, Tice H, Glavina Del Rio T, Copeland A, Cheng JF, Lucas S, Chen F, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Saunders E, Detter JC, Brettin T, Rohde M, Göker M, Spring S, Bristow J, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Eisen JA 2009 Nov 22 |
|  | Complete genome sequence of Isosphaera pallida type strain (IS1B).Göker M, Cleland D, Saunders E, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Liolios K, Pagani I, Ivanova N, Mavromatis K, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Detter JC, Beck B, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP 2011 Feb 20 |
| | See all 127 articles |
This item is licensed under a Creative Commons License
All Items in HZI are protected by copyright, with all rights reserved, unless otherwise indicated.
|