Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta.

2.50
Hdl Handle:
http://hdl.handle.net/10033/240612
Title:
Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta.
Authors:
Abt, Birte; Han, Cliff; Scheuner, Carmen; Lu, Megan; Lapidus, Alla; Nolan, Matt; Lucas, Susan; Hammon, Nancy; Deshpande, Shweta; Cheng, Jan-Fang; Tapia, Roxanne; Goodwin, Lynne A; Pitluck, Sam; Liolios, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Huntemann, Marcel; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Brambilla, Evelyne-Marie; Rohde, Manfred; Spring, Stefan; Gronow, Sabine; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C; Klenk, Hans-Peter; Detter, John C
Abstract:
Spirochaeta coccoides Dröge et al. 2006 is a member of the genus Spirochaeta Ehrenberg 1835, one of the oldest named genera within the Bacteria. S. coccoides is an obligately anaerobic, Gram-negative, non-motile, spherical bacterium that was isolated from the hindgut contents of the termite Neotermes castaneus. The species is of interest because it may play an important role in the digestion of breakdown products from cellulose and hemicellulose in the termite gut. Here we provide a taxonomic re-evaluation for strain SPN1(T), and based on physiological and genomic characteristics, we propose its reclassification as a novel species in the genus Sphaerochaeta, a recently published sister group of the Spirochaeta. The 2,227,296 bp long genome of strain SPN1(T) with its 1,866 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Citation:
Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta. 2012, 6 (2):194-209 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
25-May-2012
URI:
http://hdl.handle.net/10033/240612
DOI:
10.4056/sigs.2796069
PubMed ID:
22768363
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
Publications of Dept. Medizinische Mikrobiologie (MMIK)

Full metadata record

DC FieldValue Language
dc.contributor.authorAbt, Birteen_GB
dc.contributor.authorHan, Cliffen_GB
dc.contributor.authorScheuner, Carmenen_GB
dc.contributor.authorLu, Meganen_GB
dc.contributor.authorLapidus, Allaen_GB
dc.contributor.authorNolan, Matten_GB
dc.contributor.authorLucas, Susanen_GB
dc.contributor.authorHammon, Nancyen_GB
dc.contributor.authorDeshpande, Shwetaen_GB
dc.contributor.authorCheng, Jan-Fangen_GB
dc.contributor.authorTapia, Roxanneen_GB
dc.contributor.authorGoodwin, Lynne Aen_GB
dc.contributor.authorPitluck, Samen_GB
dc.contributor.authorLiolios, Konstantinosen_GB
dc.contributor.authorPagani, Ioannaen_GB
dc.contributor.authorIvanova, Nataliaen_GB
dc.contributor.authorMavromatis, Konstantinosen_GB
dc.contributor.authorMikhailova, Nataliaen_GB
dc.contributor.authorHuntemann, Marcelen_GB
dc.contributor.authorPati, Amritaen_GB
dc.contributor.authorChen, Amyen_GB
dc.contributor.authorPalaniappan, Krishnaen_GB
dc.contributor.authorLand, Miriamen_GB
dc.contributor.authorHauser, Lorenen_GB
dc.contributor.authorBrambilla, Evelyne-Marieen_GB
dc.contributor.authorRohde, Manfreden_GB
dc.contributor.authorSpring, Stefanen_GB
dc.contributor.authorGronow, Sabineen_GB
dc.contributor.authorGöker, Markusen_GB
dc.contributor.authorWoyke, Tanjaen_GB
dc.contributor.authorBristow, Jamesen_GB
dc.contributor.authorEisen, Jonathan Aen_GB
dc.contributor.authorMarkowitz, Victoren_GB
dc.contributor.authorHugenholtz, Philipen_GB
dc.contributor.authorKyrpides, Nikos Cen_GB
dc.contributor.authorKlenk, Hans-Peteren_GB
dc.contributor.authorDetter, John Cen_GB
dc.date.accessioned2012-08-30T09:58:42Z-
dc.date.available2012-08-30T09:58:42Z-
dc.date.issued2012-05-25-
dc.identifier.citationComplete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta. 2012, 6 (2):194-209 Stand Genomic Scien_GB
dc.identifier.issn1944-3277-
dc.identifier.pmid22768363-
dc.identifier.doi10.4056/sigs.2796069-
dc.identifier.urihttp://hdl.handle.net/10033/240612-
dc.description.abstractSpirochaeta coccoides Dröge et al. 2006 is a member of the genus Spirochaeta Ehrenberg 1835, one of the oldest named genera within the Bacteria. S. coccoides is an obligately anaerobic, Gram-negative, non-motile, spherical bacterium that was isolated from the hindgut contents of the termite Neotermes castaneus. The species is of interest because it may play an important role in the digestion of breakdown products from cellulose and hemicellulose in the termite gut. Here we provide a taxonomic re-evaluation for strain SPN1(T), and based on physiological and genomic characteristics, we propose its reclassification as a novel species in the genus Sphaerochaeta, a recently published sister group of the Spirochaeta. The 2,227,296 bp long genome of strain SPN1(T) with its 1,866 protein-coding and 58 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.en_GB
dc.language.isoenen
dc.rightsArchived with thanks to Standards in genomic sciencesen_GB
dc.titleComplete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Sphaerochaeta.en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen_GB

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