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Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1).
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| Title: | Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1). |
| Authors: | Mavromatis, Konstantinos
Chertkov, Olga
Lapidus, Alla
Nolan, Matt
Lucas, Susan
Tice, Hope
Del Rio, Tijana Glavina
Cheng, Jan-Fang
Han, Cliff
Tapia, Roxanne
Bruce, David
Goodwin, Lynne A
Pitluck, Sam
Huntemann, Marcel
Liolios, Konstantinos
Pagani, Ioanna
Ivanova, Natalia
Mikhailova, Natalia
Pati, Amrita
Chen, Amy
Palaniappan, Krishna
Land, Miriam
Brambilla, Evelyne-Marie
Rohde, Manfred
Spring, Stefan
Göker, Markus
Detter, John C
Bristow, James
Eisen, Jonathan A
Markowitz, Victor
Hugenholtz, Philip
Kyrpides, Nikos C
Klenk, Hans-Peter
Woyke, Tanja |
| Citation: | Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1). 2012, 6 (2):210-9 Stand Genomic Sci |
| Journal: | Standards in genomic sciences |
| Issue Date: | 25-May-2012 |
| URI: | http://hdl.handle.net/10033/247131 |
| DOI: | 10.4056/sigs.2816096 |
| PubMed ID: | 22768364 |
| Abstract: | Saprospira grandis Gross 1911 is a member of the Saprospiraceae, a family in the class 'Sphingobacteria' that remains poorly characterized at the genomic level. The species is known for preying on other marine bacteria via 'ixotrophy'. S. grandis strain Sa g1 was isolated from decaying crab carapace in France and was selected for genome sequencing because of its isolated location in the tree of life. Only one type strain genome has been published so far from the Saprospiraceae, while the sequence of strain Sa g1 represents the second genome to be published from a non-type strain of S. grandis. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 4,495,250 bp long Improved-High-Quality draft of the genome with its 3,536 protein-coding and 62 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project. |
| Type: | Article |
| Language: | en |
| ISSN: | 1944-3277 |
| Appears in Collections: | Publications of Dept. Medizinische Mikrobiologie (MMIK)
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