2.50
Hdl Handle:
http://hdl.handle.net/10033/332376
Title:
Complete genome sequence of Saccharomonospora viridis type strain (P101).
Authors:
Pati, Amrita; Sikorski, Johannes; Nolan, Matt; Lapidus, Alla; Copeland, Alex; Glavina Del Rio, Tijana; Lucas, Susan; Chen, Feng; Tice, Hope; Pitluck, Sam; Cheng, Jan-Fang; Chertkov, Olga; Brettin, Thomas; Han, Cliff; Detter, John C; Kuske, Cheryl; Bruce, David; Goodwin, Lynne; Chain, Patrick; D'haeseleer, Patrik; Chen, Amy; Palaniappan, Krishna; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Rohde, Manfred; Tindall, Brian J; Göker, Markus; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C; Klenk, Hans-Peter
Abstract:
Saccharomonospora viridis (Schuurmans et al. 1956) Nonomurea and Ohara 1971 is the type species of the genus Saccharomonospora which belongs to the family Pseudonocardiaceae. S. viridis is of interest because it is a Gram-negative organism classified among the usually Gram-positive actinomycetes. Members of the species are frequently found in hot compost and hay, and its spores can cause farmer's lung disease, bagassosis, and humidifier fever. Strains of the species S. viridis have been found to metabolize the xenobiotic pentachlorophenol (PCP). The strain described in this study has been isolated from peat-bog in Ireland. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the family Pseudonocardiaceae, and the 4,308,349 bp long single replicon genome with its 3906 protein-coding and 64 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Citation:
Complete genome sequence of Saccharomonospora viridis type strain (P101). 2009, 1 (2):141-9 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
2009
URI:
http://hdl.handle.net/10033/332376
DOI:
10.4056/sigs.20263
PubMed ID:
21304650
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
Publications of Dept. Medizinische Mikrobiologie (MMIK)

Full metadata record

DC FieldValue Language
dc.contributor.authorPati, Amritaen
dc.contributor.authorSikorski, Johannesen
dc.contributor.authorNolan, Matten
dc.contributor.authorLapidus, Allaen
dc.contributor.authorCopeland, Alexen
dc.contributor.authorGlavina Del Rio, Tijanaen
dc.contributor.authorLucas, Susanen
dc.contributor.authorChen, Fengen
dc.contributor.authorTice, Hopeen
dc.contributor.authorPitluck, Samen
dc.contributor.authorCheng, Jan-Fangen
dc.contributor.authorChertkov, Olgaen
dc.contributor.authorBrettin, Thomasen
dc.contributor.authorHan, Cliffen
dc.contributor.authorDetter, John Cen
dc.contributor.authorKuske, Cherylen
dc.contributor.authorBruce, Daviden
dc.contributor.authorGoodwin, Lynneen
dc.contributor.authorChain, Patricken
dc.contributor.authorD'haeseleer, Patriken
dc.contributor.authorChen, Amyen
dc.contributor.authorPalaniappan, Krishnaen
dc.contributor.authorIvanova, Nataliaen
dc.contributor.authorMavromatis, Konstantinosen
dc.contributor.authorMikhailova, Nataliaen
dc.contributor.authorRohde, Manfreden
dc.contributor.authorTindall, Brian Jen
dc.contributor.authorGöker, Markusen
dc.contributor.authorBristow, Jimen
dc.contributor.authorEisen, Jonathan Aen
dc.contributor.authorMarkowitz, Victoren
dc.contributor.authorHugenholtz, Philipen
dc.contributor.authorKyrpides, Nikos Cen
dc.contributor.authorKlenk, Hans-Peteren
dc.date.accessioned2014-10-09T11:03:24Z-
dc.date.available2014-10-09T11:03:24Z-
dc.date.issued2009-
dc.identifier.citationComplete genome sequence of Saccharomonospora viridis type strain (P101). 2009, 1 (2):141-9 Stand Genomic Scien
dc.identifier.issn1944-3277-
dc.identifier.pmid21304650-
dc.identifier.doi10.4056/sigs.20263-
dc.identifier.urihttp://hdl.handle.net/10033/332376-
dc.description.abstractSaccharomonospora viridis (Schuurmans et al. 1956) Nonomurea and Ohara 1971 is the type species of the genus Saccharomonospora which belongs to the family Pseudonocardiaceae. S. viridis is of interest because it is a Gram-negative organism classified among the usually Gram-positive actinomycetes. Members of the species are frequently found in hot compost and hay, and its spores can cause farmer's lung disease, bagassosis, and humidifier fever. Strains of the species S. viridis have been found to metabolize the xenobiotic pentachlorophenol (PCP). The strain described in this study has been isolated from peat-bog in Ireland. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the family Pseudonocardiaceae, and the 4,308,349 bp long single replicon genome with its 3906 protein-coding and 64 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.en
dc.language.isoenen
dc.rightsArchived with thanks to Standards in genomic sciencesen
dc.titleComplete genome sequence of Saccharomonospora viridis type strain (P101).en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen

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