2.50
Hdl Handle:
http://hdl.handle.net/10033/333425
Title:
Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1).
Authors:
Djao, Olivier Duplex Ngatchou; Zhang, Xiaojing; Lucas, Susan; Lapidus, Alla; Del Rio, Tijana Glavina; Nolan, Matt; Tice, Hope; Cheng, Jan-Fang; Han, Cliff; Tapia, Roxanne; Goodwin, Lynne; Pitluck, Sam; Liolios, Konstantinos; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Ovchinnikova, Galina; Pati, Amrita; Brambilla, Evelyne; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D; Rohde, Manfred; Sikorski, Johannes; Spring, Stefan; Göker, Markus; Detter, John C; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C; Klenk, Hans-Peter
Abstract:
Syntrophothermus lipocalidus Sekiguchi et al. 2000 is the type species of the genus Syntrophothermus. The species is of interest because of its strictly anaerobic lifestyle, its participation in the primary step of the degradation of organic maters, and for releasing products which serve as substrates for other microorganisms. It also contributes significantly to maintain a regular pH in its environment by removing the fatty acids through β-oxidation. The strain is able to metabolize isobutyrate and butyrate, which are the substrate and the product of degradation of the substrate, respectively. This is the first complete genome sequence of a member of the genus Syntrophothermus and the second in the family Syntrophomonadaceae. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,405,559 bp long genome with its 2,385 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Citation:
Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1). 2010, 3 (3):268-75 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
2010
URI:
http://hdl.handle.net/10033/333425
DOI:
10.4056/sigs.1233249
PubMed ID:
21304731
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
Publications of Dept. Medizinische Mikrobiologie (MMIK)

Full metadata record

DC FieldValue Language
dc.contributor.authorDjao, Olivier Duplex Ngatchouen
dc.contributor.authorZhang, Xiaojingen
dc.contributor.authorLucas, Susanen
dc.contributor.authorLapidus, Allaen
dc.contributor.authorDel Rio, Tijana Glavinaen
dc.contributor.authorNolan, Matten
dc.contributor.authorTice, Hopeen
dc.contributor.authorCheng, Jan-Fangen
dc.contributor.authorHan, Cliffen
dc.contributor.authorTapia, Roxanneen
dc.contributor.authorGoodwin, Lynneen
dc.contributor.authorPitluck, Samen
dc.contributor.authorLiolios, Konstantinosen
dc.contributor.authorIvanova, Nataliaen
dc.contributor.authorMavromatis, Konstantinosen
dc.contributor.authorMikhailova, Nataliaen
dc.contributor.authorOvchinnikova, Galinaen
dc.contributor.authorPati, Amritaen
dc.contributor.authorBrambilla, Evelyneen
dc.contributor.authorChen, Amyen
dc.contributor.authorPalaniappan, Krishnaen
dc.contributor.authorLand, Miriamen
dc.contributor.authorHauser, Lorenen
dc.contributor.authorChang, Yun-Juanen
dc.contributor.authorJeffries, Cynthia Den
dc.contributor.authorRohde, Manfreden
dc.contributor.authorSikorski, Johannesen
dc.contributor.authorSpring, Stefanen
dc.contributor.authorGöker, Markusen
dc.contributor.authorDetter, John Cen
dc.contributor.authorWoyke, Tanjaen
dc.contributor.authorBristow, Jamesen
dc.contributor.authorEisen, Jonathan Aen
dc.contributor.authorMarkowitz, Victoren
dc.contributor.authorHugenholtz, Philipen
dc.contributor.authorKyrpides, Nikos Cen
dc.contributor.authorKlenk, Hans-Peteren
dc.date.accessioned2014-10-30T10:07:37Z-
dc.date.available2014-10-30T10:07:37Z-
dc.date.issued2010-
dc.identifier.citationComplete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1). 2010, 3 (3):268-75 Stand Genomic Scien
dc.identifier.issn1944-3277-
dc.identifier.pmid21304731-
dc.identifier.doi10.4056/sigs.1233249-
dc.identifier.urihttp://hdl.handle.net/10033/333425-
dc.description.abstractSyntrophothermus lipocalidus Sekiguchi et al. 2000 is the type species of the genus Syntrophothermus. The species is of interest because of its strictly anaerobic lifestyle, its participation in the primary step of the degradation of organic maters, and for releasing products which serve as substrates for other microorganisms. It also contributes significantly to maintain a regular pH in its environment by removing the fatty acids through β-oxidation. The strain is able to metabolize isobutyrate and butyrate, which are the substrate and the product of degradation of the substrate, respectively. This is the first complete genome sequence of a member of the genus Syntrophothermus and the second in the family Syntrophomonadaceae. Here we describe the features of this organism, together with the complete genome sequence and annotation. The 2,405,559 bp long genome with its 2,385 protein-coding and 55 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.en
dc.language.isoenen
dc.rightsArchived with thanks to Standards in genomic sciencesen
dc.titleComplete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1).en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen

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