2.50
Hdl Handle:
http://hdl.handle.net/10033/335850
Title:
Complete genome sequence of Haloterrigena turkmenica type strain (4k).
Authors:
Saunders, Elisabeth; Tindall, Brian J; Fähnrich, Regine; Lapidus, Alla; Copeland, Alex; Del Rio, Tijana Glavina; Lucas, Susan; Chen, Feng; Tice, Hope; Cheng, Jan-Fang; Han, Cliff; Detter, John C; Bruce, David; Goodwin, Lynne; Chain, Patrick; Pitluck, Sam; Pati, Amrita; Ivanova, Natalia; Mavromatis, Konstantinos; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D; Brettin, Thomas; Rohde, Manfred; Göker, Markus; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Klenk, Hans-Peter; Kyrpides, Nikos C
Abstract:
Haloterrigena turkmenica (Zvyagintseva and Tarasov 1987) Ventosa et al. 1999, comb. nov. is the type species of the genus Haloterrigena in the euryarchaeal family Halobacteriaceae. It is of phylogenetic interest because of the yet unclear position of the genera Haloterrigena and Natrinema within the Halobacteriaceae, which created some taxonomic problems historically. H. turkmenica, was isolated from sulfate saline soil in Turkmenistan, is a relatively fast growing, chemoorganotrophic, carotenoid-containing, extreme halophile, requiring at least 2 M NaCl for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Haloterrigena, but the eighth genome sequence from a member of the family Halobacteriaceae. The 5,440,782 bp genome (including six plasmids) with its 5,287 protein-coding and 63 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.
Citation:
Complete genome sequence of Haloterrigena turkmenica type strain (4k). 2010, 2 (1):107-16 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
2010
URI:
http://hdl.handle.net/10033/335850
DOI:
10.4056/sigs.681272
PubMed ID:
21304683
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
Publications of Dept. Medizinische Mikrobiologie (MMIK)

Full metadata record

DC FieldValue Language
dc.contributor.authorSaunders, Elisabethen
dc.contributor.authorTindall, Brian Jen
dc.contributor.authorFähnrich, Regineen
dc.contributor.authorLapidus, Allaen
dc.contributor.authorCopeland, Alexen
dc.contributor.authorDel Rio, Tijana Glavinaen
dc.contributor.authorLucas, Susanen
dc.contributor.authorChen, Fengen
dc.contributor.authorTice, Hopeen
dc.contributor.authorCheng, Jan-Fangen
dc.contributor.authorHan, Cliffen
dc.contributor.authorDetter, John Cen
dc.contributor.authorBruce, Daviden
dc.contributor.authorGoodwin, Lynneen
dc.contributor.authorChain, Patricken
dc.contributor.authorPitluck, Samen
dc.contributor.authorPati, Amritaen
dc.contributor.authorIvanova, Nataliaen
dc.contributor.authorMavromatis, Konstantinosen
dc.contributor.authorChen, Amyen
dc.contributor.authorPalaniappan, Krishnaen
dc.contributor.authorLand, Miriamen
dc.contributor.authorHauser, Lorenen
dc.contributor.authorChang, Yun-Juanen
dc.contributor.authorJeffries, Cynthia Den
dc.contributor.authorBrettin, Thomasen
dc.contributor.authorRohde, Manfreden
dc.contributor.authorGöker, Markusen
dc.contributor.authorBristow, Jamesen
dc.contributor.authorEisen, Jonathan Aen
dc.contributor.authorMarkowitz, Victoren
dc.contributor.authorHugenholtz, Philipen
dc.contributor.authorKlenk, Hans-Peteren
dc.contributor.authorKyrpides, Nikos Cen
dc.date.accessioned2014-11-20T10:08:06Z-
dc.date.available2014-11-20T10:08:06Z-
dc.date.issued2010-
dc.identifier.citationComplete genome sequence of Haloterrigena turkmenica type strain (4k). 2010, 2 (1):107-16 Stand Genomic Scien
dc.identifier.issn1944-3277-
dc.identifier.pmid21304683-
dc.identifier.doi10.4056/sigs.681272-
dc.identifier.urihttp://hdl.handle.net/10033/335850-
dc.description.abstractHaloterrigena turkmenica (Zvyagintseva and Tarasov 1987) Ventosa et al. 1999, comb. nov. is the type species of the genus Haloterrigena in the euryarchaeal family Halobacteriaceae. It is of phylogenetic interest because of the yet unclear position of the genera Haloterrigena and Natrinema within the Halobacteriaceae, which created some taxonomic problems historically. H. turkmenica, was isolated from sulfate saline soil in Turkmenistan, is a relatively fast growing, chemoorganotrophic, carotenoid-containing, extreme halophile, requiring at least 2 M NaCl for growth. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of the genus Haloterrigena, but the eighth genome sequence from a member of the family Halobacteriaceae. The 5,440,782 bp genome (including six plasmids) with its 5,287 protein-coding and 63 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.en
dc.language.isoenen
dc.titleComplete genome sequence of Haloterrigena turkmenica type strain (4k).en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen

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