2.50
Hdl Handle:
http://hdl.handle.net/10033/336252
Title:
Complete genome sequence of Desulfohalobium retbaense type strain (HR(100)).
Authors:
Spring, Stefan; Nolan, Matt; Lapidus, Alla; Glavina Del Rio, Tijana; Copeland, Alex; Tice, Hope; Cheng, Jan-Fang; Lucas, Susan; Land, Miriam; Chen, Feng; Bruce, David; Goodwin, Lynne; Pitluck, Sam; Ivanova, Natalia; Mavromatis, Konstantinos; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Hauser, Loren; Chang, Yun-Juan; Jeffries, Cynthia D; Munk, Christine; Kiss, Hajnalka; Chain, Patrick; Han, Cliff; Brettin, Thomas; Detter, John C; Schüler, Esther; Göker, Markus; Rohde, Manfred; Bristow, Jim; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C; Klenk, Hans-Peter
Abstract:
Desulfohalobium retbaense (Ollivier et al. 1991) is the type species of the polyphyletic genus Desulfohalobium, which comprises, at the time of writing, two species and represents the family Desulfohalobiaceae within the Deltaproteobacteria. D. retbaense is a moderately halophilic sulfate-reducing bacterium, which can utilize H(2) and a limited range of organic substrates, which are incompletely oxidized to acetate and CO(2), for growth. The type strain HR(100) (T) was isolated from sediments of the hypersaline Retba Lake in Senegal. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the family Desulfohalobiaceae. The 2,909,567 bp genome (one chromosome and a 45,263 bp plasmid) with its 2,552 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.
Citation:
Complete genome sequence of Desulfohalobium retbaense type strain (HR(100)). 2010, 2 (1):38-48 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
2010
URI:
http://hdl.handle.net/10033/336252
DOI:
10.4056/sigs.581048
PubMed ID:
21304676
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
Publications of Dept. Medizinische Mikrobiologie (MMIK)

Full metadata record

DC FieldValue Language
dc.contributor.authorSpring, Stefanen
dc.contributor.authorNolan, Matten
dc.contributor.authorLapidus, Allaen
dc.contributor.authorGlavina Del Rio, Tijanaen
dc.contributor.authorCopeland, Alexen
dc.contributor.authorTice, Hopeen
dc.contributor.authorCheng, Jan-Fangen
dc.contributor.authorLucas, Susanen
dc.contributor.authorLand, Miriamen
dc.contributor.authorChen, Fengen
dc.contributor.authorBruce, Daviden
dc.contributor.authorGoodwin, Lynneen
dc.contributor.authorPitluck, Samen
dc.contributor.authorIvanova, Nataliaen
dc.contributor.authorMavromatis, Konstantinosen
dc.contributor.authorMikhailova, Nataliaen
dc.contributor.authorPati, Amritaen
dc.contributor.authorChen, Amyen
dc.contributor.authorPalaniappan, Krishnaen
dc.contributor.authorHauser, Lorenen
dc.contributor.authorChang, Yun-Juanen
dc.contributor.authorJeffries, Cynthia Den
dc.contributor.authorMunk, Christineen
dc.contributor.authorKiss, Hajnalkaen
dc.contributor.authorChain, Patricken
dc.contributor.authorHan, Cliffen
dc.contributor.authorBrettin, Thomasen
dc.contributor.authorDetter, John Cen
dc.contributor.authorSchüler, Estheren
dc.contributor.authorGöker, Markusen
dc.contributor.authorRohde, Manfreden
dc.contributor.authorBristow, Jimen
dc.contributor.authorEisen, Jonathan Aen
dc.contributor.authorMarkowitz, Victoren
dc.contributor.authorHugenholtz, Philipen
dc.contributor.authorKyrpides, Nikos Cen
dc.contributor.authorKlenk, Hans-Peteren
dc.date.accessioned2014-11-27T11:55:53Z-
dc.date.available2014-11-27T11:55:53Z-
dc.date.issued2010-
dc.identifier.citationComplete genome sequence of Desulfohalobium retbaense type strain (HR(100)). 2010, 2 (1):38-48 Stand Genomic Scien
dc.identifier.issn1944-3277-
dc.identifier.pmid21304676-
dc.identifier.doi10.4056/sigs.581048-
dc.identifier.urihttp://hdl.handle.net/10033/336252-
dc.description.abstractDesulfohalobium retbaense (Ollivier et al. 1991) is the type species of the polyphyletic genus Desulfohalobium, which comprises, at the time of writing, two species and represents the family Desulfohalobiaceae within the Deltaproteobacteria. D. retbaense is a moderately halophilic sulfate-reducing bacterium, which can utilize H(2) and a limited range of organic substrates, which are incompletely oxidized to acetate and CO(2), for growth. The type strain HR(100) (T) was isolated from sediments of the hypersaline Retba Lake in Senegal. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the family Desulfohalobiaceae. The 2,909,567 bp genome (one chromosome and a 45,263 bp plasmid) with its 2,552 protein-coding and 57 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.en
dc.language.isoenen
dc.titleComplete genome sequence of Desulfohalobium retbaense type strain (HR(100)).en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen

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