Genome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group.

2.50
Hdl Handle:
http://hdl.handle.net/10033/581809
Title:
Genome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group.
Authors:
Lau, Stanley Ck; Riedel, Thomas; Fiebig, Anne; Han, James; Huntemann, Marcel; Petersen, Jörn; Ivanova, Natalia N; Markowitz, Victor; Woyke, Tanja; Göker, Markus; Kyrpides, Nikos C; Klenk, Hans-Peter; Qian, Pei-Yuan
Abstract:
Loktanella hongkongensis UST950701-009P(T) is a Gram-negative, non-motile and rod-shaped bacterium isolated from a marine biofilm in the subtropical seawater of Hong Kong. When growing as a monospecies biofilm on polystyrene surfaces, this bacterium is able to induce larval settlement and metamorphosis of a ubiquitous polychaete tubeworm Hydroides elegans. The inductive cues are low-molecular weight compounds bound to the exopolymeric matrix of the bacterial cells. In the present study we describe the features of L. hongkongensis strain DSM 17492(T) together with its genome sequence and annotation and novel aspects of its phenotype. The 3,198,444 bp long genome sequence encodes 3104 protein-coding genes and 57 RNA genes. The two unambiguously identified extrachromosomal replicons contain replication modules of the RepB and the Rhodobacteraceae-specific DnaA-like type, respectively.
Citation:
Genome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group. 2015, 10:51 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
2015
URI:
http://hdl.handle.net/10033/581809
DOI:
10.1186/s40793-015-0050-9
PubMed ID:
26380639
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
publications of the research group immunology of infection (INI)

Full metadata record

DC FieldValue Language
dc.contributor.authorLau, Stanley Cken
dc.contributor.authorRiedel, Thomasen
dc.contributor.authorFiebig, Anneen
dc.contributor.authorHan, Jamesen
dc.contributor.authorHuntemann, Marcelen
dc.contributor.authorPetersen, Jörnen
dc.contributor.authorIvanova, Natalia Nen
dc.contributor.authorMarkowitz, Victoren
dc.contributor.authorWoyke, Tanjaen
dc.contributor.authorGöker, Markusen
dc.contributor.authorKyrpides, Nikos Cen
dc.contributor.authorKlenk, Hans-Peteren
dc.contributor.authorQian, Pei-Yuanen
dc.date.accessioned2015-11-05T12:26:40Zen
dc.date.available2015-11-05T12:26:40Zen
dc.date.issued2015en
dc.identifier.citationGenome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group. 2015, 10:51 Stand Genomic Scien
dc.identifier.issn1944-3277en
dc.identifier.pmid26380639en
dc.identifier.doi10.1186/s40793-015-0050-9en
dc.identifier.urihttp://hdl.handle.net/10033/581809en
dc.description.abstractLoktanella hongkongensis UST950701-009P(T) is a Gram-negative, non-motile and rod-shaped bacterium isolated from a marine biofilm in the subtropical seawater of Hong Kong. When growing as a monospecies biofilm on polystyrene surfaces, this bacterium is able to induce larval settlement and metamorphosis of a ubiquitous polychaete tubeworm Hydroides elegans. The inductive cues are low-molecular weight compounds bound to the exopolymeric matrix of the bacterial cells. In the present study we describe the features of L. hongkongensis strain DSM 17492(T) together with its genome sequence and annotation and novel aspects of its phenotype. The 3,198,444 bp long genome sequence encodes 3104 protein-coding genes and 57 RNA genes. The two unambiguously identified extrachromosomal replicons contain replication modules of the RepB and the Rhodobacteraceae-specific DnaA-like type, respectively.en
dc.language.isoenen
dc.titleGenome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group.en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen

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