High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg mass

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Hdl Handle:
http://hdl.handle.net/10033/620956
Title:
High quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg mass
Authors:
Laviad, Sivan; Lapidus, Alla; Han, James; Haynes, Matthew; Reddy, TBK; Huntemann, Marcel; Pati, Amrita; Ivanova, Natalia N; Mavromatis, Konstantinos; Lang, Elke; Rohde, Manfred; Markowitz, Victor; Woyke, Tanja; Klenk, Hans-Peter; Kyrpides, Nikos C; Halpern, Malka
Abstract:
Abstract Brachymonas chironomi strain AIMA4T (Halpern et al., 2009) is a Gram-negative, non-motile, aerobic, chemoorganotroph bacterium. B. chironomi is a member of the Comamonadaceae, a family within the class Betaproteobacteria. This species was isolated from a chironomid (Diptera; Chironomidae) egg mass, sampled from a waste stabilization pond in northern Israel. Phylogenetic analysis based on the 16S rRNA gene sequences placed strain AIMA4T in the genus Brachymonas. Here we describe the features of this organism, together with the complete genome sequence and annotation. The DNA GC content is 63.5%. The chromosome length is 2,509,395 bp. It encodes 2,382 proteins and 68 RNA genes. Brachymonas chironomi genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project.
Citation:
Standards in Genomic Sciences. 2015 May 27;10(1):29
Issue Date:
27-May-2015
URI:
http://dx.doi.org/10.1186/s40793-015-0010-4; http://hdl.handle.net/10033/620956
Type:
Journal Article
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dc.contributor.authorLaviad, Sivanen
dc.contributor.authorLapidus, Allaen
dc.contributor.authorHan, Jamesen
dc.contributor.authorHaynes, Matthewen
dc.contributor.authorReddy, TBKen
dc.contributor.authorHuntemann, Marcelen
dc.contributor.authorPati, Amritaen
dc.contributor.authorIvanova, Natalia Nen
dc.contributor.authorMavromatis, Konstantinosen
dc.contributor.authorLang, Elkeen
dc.contributor.authorRohde, Manfreden
dc.contributor.authorMarkowitz, Victoren
dc.contributor.authorWoyke, Tanjaen
dc.contributor.authorKlenk, Hans-Peteren
dc.contributor.authorKyrpides, Nikos Cen
dc.contributor.authorHalpern, Malkaen
dc.date.accessioned2017-06-16T08:08:30Z-
dc.date.available2017-06-16T08:08:30Z-
dc.date.issued2015-05-27en
dc.identifier.citationStandards in Genomic Sciences. 2015 May 27;10(1):29en
dc.identifier.urihttp://dx.doi.org/10.1186/s40793-015-0010-4en
dc.identifier.urihttp://hdl.handle.net/10033/620956-
dc.description.abstractAbstract Brachymonas chironomi strain AIMA4T (Halpern et al., 2009) is a Gram-negative, non-motile, aerobic, chemoorganotroph bacterium. B. chironomi is a member of the Comamonadaceae, a family within the class Betaproteobacteria. This species was isolated from a chironomid (Diptera; Chironomidae) egg mass, sampled from a waste stabilization pond in northern Israel. Phylogenetic analysis based on the 16S rRNA gene sequences placed strain AIMA4T in the genus Brachymonas. Here we describe the features of this organism, together with the complete genome sequence and annotation. The DNA GC content is 63.5%. The chromosome length is 2,509,395 bp. It encodes 2,382 proteins and 68 RNA genes. Brachymonas chironomi genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG) project.en
dc.titleHigh quality draft genome sequence of Brachymonas chironomi AIMA4T (DSM 19884T) isolated from a Chironomus sp. egg massen
dc.typeJournal Articleen
dc.language.rfc3066enen
dc.rights.holderLaviad et al.; licensee BioMed Central.en
dc.date.updated2015-09-04T08:25:19Zen
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