Complete genome sequence of Acidaminococcus fermentans type strain (VR4).
dc.contributor.author | Chang, Yun-Juan | |
dc.contributor.author | Pukall, Rüdiger | |
dc.contributor.author | Saunders, Elizabeth | |
dc.contributor.author | Lapidus, Alla | |
dc.contributor.author | Copeland, Alex | |
dc.contributor.author | Nolan, Matt | |
dc.contributor.author | Glavina Del Rio, Tijana | |
dc.contributor.author | Lucas, Susan | |
dc.contributor.author | Chen, Feng | |
dc.contributor.author | Tice, Hope | |
dc.contributor.author | Cheng, Jan-Fang | |
dc.contributor.author | Han, Cliff | |
dc.contributor.author | Detter, John C | |
dc.contributor.author | Bruce, David | |
dc.contributor.author | Goodwin, Lynne | |
dc.contributor.author | Pitluck, Sam | |
dc.contributor.author | Mikhailova, Natalia | |
dc.contributor.author | Liolios, Konstantinos | |
dc.contributor.author | Pati, Amrita | |
dc.contributor.author | Ivanova, Natalia | |
dc.contributor.author | Mavromatis, Konstantinos | |
dc.contributor.author | Chen, Amy | |
dc.contributor.author | Palaniappan, Krishna | |
dc.contributor.author | Land, Miriam | |
dc.contributor.author | Hauser, Loren | |
dc.contributor.author | Jeffries, Cynthia D | |
dc.contributor.author | Brettin, Thomas | |
dc.contributor.author | Rohde, Manfred | |
dc.contributor.author | Göker, Markus | |
dc.contributor.author | Bristow, James | |
dc.contributor.author | Eisen, Jonathan A | |
dc.contributor.author | Markowitz, Victor | |
dc.contributor.author | Hugenholtz, Philip | |
dc.contributor.author | Kyrpides, Nikos C | |
dc.contributor.author | Klenk, Hans-Peter | |
dc.date.accessioned | 2012-05-24T11:32:42Z | |
dc.date.available | 2012-05-24T11:32:42Z | |
dc.date.issued | 2010 | |
dc.identifier.citation | Complete genome sequence of Acidaminococcus fermentans type strain (VR4). 2010, 3 (1):1-14 Stand Genomic Sci | en_GB |
dc.identifier.issn | 1944-3277 | |
dc.identifier.pmid | 21304687 | |
dc.identifier.doi | 10.4056/sigs.1002553 | |
dc.identifier.uri | http://hdl.handle.net/10033/225679 | |
dc.description.abstract | Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococcus, and is of phylogenetic interest because of its isolated placement in a genomically little characterized region of the Firmicutes. A. fermentans is known for its habitation of the gastrointestinal tract and its ability to oxidize trans-aconitate. Its anaerobic fermentation of glutamate has been intensively studied and will now be complemented by the genomic basis. The strain described in this report is a nonsporulating, nonmotile, Gram-negative coccus, originally isolated from a pig alimentary tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family Acidaminococcaceae, and the 2,329,769 bp long genome with its 2,101 protein-coding and 81 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. | |
dc.language.iso | en | en |
dc.rights | Archived with thanks to Standards in genomic sciences | en_GB |
dc.title | Complete genome sequence of Acidaminococcus fermentans type strain (VR4). | en |
dc.type | Article | en |
dc.identifier.journal | Standards in genomic sciences | en_GB |
refterms.dateFOA | 2018-06-12T23:29:23Z | |
html.description.abstract | Acidaminococcus fermentans (Rogosa 1969) is the type species of the genus Acidaminococcus, and is of phylogenetic interest because of its isolated placement in a genomically little characterized region of the Firmicutes. A. fermentans is known for its habitation of the gastrointestinal tract and its ability to oxidize trans-aconitate. Its anaerobic fermentation of glutamate has been intensively studied and will now be complemented by the genomic basis. The strain described in this report is a nonsporulating, nonmotile, Gram-negative coccus, originally isolated from a pig alimentary tract. Here we describe the features of this organism, together with the complete genome sequence, and annotation. This is the first complete genome sequence of a member of the family Acidaminococcaceae, and the 2,329,769 bp long genome with its 2,101 protein-coding and 81 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project. |
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