Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T)).

2.50
Hdl Handle:
http://hdl.handle.net/10033/333834
Title:
Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T)).
Authors:
Frank, Oliver; Pradella, Silke; Rohde, Manfred; Scheuner, Carmen; Klenk, Hans-Peter; Göker, Markus; Petersen, Jörn
Abstract:
Phaeobacter gallaeciensis CIP 105210(T) (= DSM 26640(T) = BS107(T)) is the type strain of the species Phaeobacter gallaeciensis. The genus Phaeobacter belongs to the marine Roseobacter group (Rhodobacteraceae, Alphaproteobacteria). Phaeobacter species are effective colonizers of marine surfaces, including frequent associations with eukaryotes. Strain BS107(T) was isolated from a rearing of the scallop Pecten maximus. Here we describe the features of this organism, together with the complete genome sequence, comprising eight circular replicons with a total of 4,448 genes. In addition to a high number of extrachromosomal replicons, the genome contains six genomic island and three putative prophage regions, as well as a hybrid between a plasmid and a circular phage. Phylogenomic analyses confirm previous results, which indicated that the originally reported P. gallaeciensis type-strain deposit DSM 17395 belongs to P. inhibens and that CIP 105210(T) (= DSM 26640(T)) is the sole genome-sequenced representative of P. gallaeciensis.
Affiliation:
Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Citation:
Complete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T)). 2014, 9 (3):914-32 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
15-Jun-2014
URI:
http://hdl.handle.net/10033/333834
DOI:
10.4056/sigs.5179110
PubMed ID:
25197473
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
publications of the central unit for microscopy (ZEIM)

Full metadata record

DC FieldValue Language
dc.contributor.authorFrank, Oliveren
dc.contributor.authorPradella, Silkeen
dc.contributor.authorRohde, Manfreden
dc.contributor.authorScheuner, Carmenen
dc.contributor.authorKlenk, Hans-Peteren
dc.contributor.authorGöker, Markusen
dc.contributor.authorPetersen, Jörnen
dc.date.accessioned2014-11-07T14:08:47Z-
dc.date.available2014-11-07T14:08:47Z-
dc.date.issued2014-06-15-
dc.identifier.citationComplete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T)). 2014, 9 (3):914-32 Stand Genomic Scien
dc.identifier.issn1944-3277-
dc.identifier.pmid25197473-
dc.identifier.doi10.4056/sigs.5179110-
dc.identifier.urihttp://hdl.handle.net/10033/333834-
dc.description.abstractPhaeobacter gallaeciensis CIP 105210(T) (= DSM 26640(T) = BS107(T)) is the type strain of the species Phaeobacter gallaeciensis. The genus Phaeobacter belongs to the marine Roseobacter group (Rhodobacteraceae, Alphaproteobacteria). Phaeobacter species are effective colonizers of marine surfaces, including frequent associations with eukaryotes. Strain BS107(T) was isolated from a rearing of the scallop Pecten maximus. Here we describe the features of this organism, together with the complete genome sequence, comprising eight circular replicons with a total of 4,448 genes. In addition to a high number of extrachromosomal replicons, the genome contains six genomic island and three putative prophage regions, as well as a hybrid between a plasmid and a circular phage. Phylogenomic analyses confirm previous results, which indicated that the originally reported P. gallaeciensis type-strain deposit DSM 17395 belongs to P. inhibens and that CIP 105210(T) (= DSM 26640(T)) is the sole genome-sequenced representative of P. gallaeciensis.en
dc.language.isoenen
dc.titleComplete genome sequence of the Phaeobacter gallaeciensis type strain CIP 105210(T) (= DSM 26640(T) = BS107(T)).en
dc.typeArticleen
dc.contributor.departmentLeibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.en
dc.identifier.journalStandards in genomic sciencesen

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