Genome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade.

2.50
Hdl Handle:
http://hdl.handle.net/10033/583963
Title:
Genome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade.
Authors:
Beyersmann, Paul G; Chertkov, Olga; Petersen, Jörn; Fiebig, Anne; Chen, Amy; Pati, Amrita; Ivanova, Natalia; Lapidus, Alla; Goodwin, Lynne A; Chain, Patrick; Detter, John C; Rohde, Manfred ( 0000-0003-0522-3580 ) ; Gronow, Sabine; Kyrpides, Nikos C; Woyke, Tanja; Simon, Meinhard; Göker, Markus; Klenk, Hans-Peter; Brinkhoff, Thorsten
Abstract:
In 2009 Phaeobacter caeruleus was described as a novel species affiliated with the marine Roseobacter clade, which, in turn, belongs to the class Alphaproteobacteria. The genus Phaeobacter is well known for members that produce various secondary metabolites. Here we report of putative quorum sensing systems, based on the finding of six N-acyl-homoserine lactone synthetases, and show that the blue color of P. caeruleus is probably due to the production of the secondary metabolite indigoidine. Therefore, P. caeruleus might have inhibitory effects on other bacteria. In this study the genome of the type strain DSM 24564(T) was sequenced, annotated and characterized. The 5,344,419 bp long genome with its seven plasmids contains 5,227 protein-coding genes (3,904 with a predicted function) and 108 RNA genes.
Citation:
Genome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade. 2013, 8 (3):403-19 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
30-Jul-2013
URI:
http://hdl.handle.net/10033/583963
DOI:
10.4056/sigs.3927623
PubMed ID:
24501626
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
publications of the central unit for microscopy (ZEIM)

Full metadata record

DC FieldValue Language
dc.contributor.authorBeyersmann, Paul Gen
dc.contributor.authorChertkov, Olgaen
dc.contributor.authorPetersen, Jörnen
dc.contributor.authorFiebig, Anneen
dc.contributor.authorChen, Amyen
dc.contributor.authorPati, Amritaen
dc.contributor.authorIvanova, Nataliaen
dc.contributor.authorLapidus, Allaen
dc.contributor.authorGoodwin, Lynne Aen
dc.contributor.authorChain, Patricken
dc.contributor.authorDetter, John Cen
dc.contributor.authorRohde, Manfreden
dc.contributor.authorGronow, Sabineen
dc.contributor.authorKyrpides, Nikos Cen
dc.contributor.authorWoyke, Tanjaen
dc.contributor.authorSimon, Meinharden
dc.contributor.authorGöker, Markusen
dc.contributor.authorKlenk, Hans-Peteren
dc.contributor.authorBrinkhoff, Thorstenen
dc.date.accessioned2015-12-15T15:39:39Zen
dc.date.available2015-12-15T15:39:39Zen
dc.date.issued2013-07-30en
dc.identifier.citationGenome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade. 2013, 8 (3):403-19 Stand Genomic Scien
dc.identifier.issn1944-3277en
dc.identifier.pmid24501626en
dc.identifier.doi10.4056/sigs.3927623en
dc.identifier.urihttp://hdl.handle.net/10033/583963en
dc.description.abstractIn 2009 Phaeobacter caeruleus was described as a novel species affiliated with the marine Roseobacter clade, which, in turn, belongs to the class Alphaproteobacteria. The genus Phaeobacter is well known for members that produce various secondary metabolites. Here we report of putative quorum sensing systems, based on the finding of six N-acyl-homoserine lactone synthetases, and show that the blue color of P. caeruleus is probably due to the production of the secondary metabolite indigoidine. Therefore, P. caeruleus might have inhibitory effects on other bacteria. In this study the genome of the type strain DSM 24564(T) was sequenced, annotated and characterized. The 5,344,419 bp long genome with its seven plasmids contains 5,227 protein-coding genes (3,904 with a predicted function) and 108 RNA genes.en
dc.language.isoenen
dc.titleGenome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade.en
dc.typeArticleen
dc.identifier.journalStandards in genomic sciencesen

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