Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)).

2.50
Hdl Handle:
http://hdl.handle.net/10033/617651
Title:
Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)).
Authors:
Kappler, Ulrike; Davenport, Karen; Beatson, Scott; Lapidus, Alla; Pan, Chongle; Han, Cliff; Montero-Calasanz, Maria Del Carmen; Land, Miriam; Hauser, Loren; Rohde, Manfred; Göker, Markus; Ivanova, Natalia; Woyke, Tanja; Klenk, Hans-Peter; Kyrpides, Nikos C
Abstract:
Thioalkalimicrobium cyclicum Sorokin et al. 2002 is a member of the family Piscirickettsiaceae in the order Thiotrichales. The γ-proteobacterium belongs to the colourless sulfur-oxidizing bacteria isolated from saline soda lakes with stable alkaline pH, such as Lake Mono (California) and Soap Lake (Washington State). Strain ALM 1(T) is characterized by its adaptation to life in the oxic/anoxic interface towards the less saline aerobic waters (mixolimnion) of the stable stratified alkaline salt lakes. Strain ALM 1(T) is the first representative of the genus Thioalkalimicrobium whose genome sequence has been deciphered and the fourth genome sequence of a type strain of the Piscirickettsiaceae to be published. The 1,932,455 bp long chromosome with its 1,684 protein-coding and 50 RNA genes was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program (CSP) 2008.
Affiliation:
Helmholtzzentrum für Infektionsforschung, 38124 Braunschweig
Citation:
Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)). 2016, 11:38 Stand Genomic Sci
Journal:
Standards in genomic sciences
Issue Date:
2016
URI:
http://hdl.handle.net/10033/617651
DOI:
10.1186/s40793-016-0162-x
PubMed ID:
27274784
Type:
Article
Language:
en
ISSN:
1944-3277
Appears in Collections:
publications of the central unit for microscopy (ZEIM)

Full metadata record

DC FieldValue Language
dc.contributor.authorKappler, Ulrikeen
dc.contributor.authorDavenport, Karenen
dc.contributor.authorBeatson, Scotten
dc.contributor.authorLapidus, Allaen
dc.contributor.authorPan, Chongleen
dc.contributor.authorHan, Cliffen
dc.contributor.authorMontero-Calasanz, Maria Del Carmenen
dc.contributor.authorLand, Miriamen
dc.contributor.authorHauser, Lorenen
dc.contributor.authorRohde, Manfreden
dc.contributor.authorGöker, Markusen
dc.contributor.authorIvanova, Nataliaen
dc.contributor.authorWoyke, Tanjaen
dc.contributor.authorKlenk, Hans-Peteren
dc.contributor.authorKyrpides, Nikos Cen
dc.date.accessioned2016-07-28T12:01:06Z-
dc.date.available2016-07-28T12:01:06Z-
dc.date.issued2016-
dc.identifier.citationComplete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)). 2016, 11:38 Stand Genomic Scien
dc.identifier.issn1944-3277-
dc.identifier.pmid27274784-
dc.identifier.doi10.1186/s40793-016-0162-x-
dc.identifier.urihttp://hdl.handle.net/10033/617651-
dc.description.abstractThioalkalimicrobium cyclicum Sorokin et al. 2002 is a member of the family Piscirickettsiaceae in the order Thiotrichales. The γ-proteobacterium belongs to the colourless sulfur-oxidizing bacteria isolated from saline soda lakes with stable alkaline pH, such as Lake Mono (California) and Soap Lake (Washington State). Strain ALM 1(T) is characterized by its adaptation to life in the oxic/anoxic interface towards the less saline aerobic waters (mixolimnion) of the stable stratified alkaline salt lakes. Strain ALM 1(T) is the first representative of the genus Thioalkalimicrobium whose genome sequence has been deciphered and the fourth genome sequence of a type strain of the Piscirickettsiaceae to be published. The 1,932,455 bp long chromosome with its 1,684 protein-coding and 50 RNA genes was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program (CSP) 2008.en
dc.language.isoenen
dc.titleComplete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)).en
dc.typeArticleen
dc.contributor.departmentHelmholtzzentrum für Infektionsforschung, 38124 Braunschweigen
dc.identifier.journalStandards in genomic sciencesen

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