Genome sequence of the Roseovarius mucosus type strain (DSM 17069T), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii

2.50
Hdl Handle:
http://hdl.handle.net/10033/620846
Title:
Genome sequence of the Roseovarius mucosus type strain (DSM 17069T), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii
Authors:
Riedel, Thomas; Spring, Stefan; Fiebig, Anne; Scheuner, Carmen; Petersen, Jörn; Göker, Markus; Klenk, Hans-Peter
Abstract:
Abstract Roseovarius mucosus Biebl et al. 2005 is a bacteriochlorophyll a-producing representative of the marine Roseobacter group within the alphaproteobacterial family Rhodobacteraceae, which was isolated from the dinoflagellate Alexandrium ostenfeldii. The marine Roseobacter group was found to be abundant in the ocean and plays an important role for global and biogeochemical processes. Here we describe the features of the R. mucosus strain DFL-24T together with its genome sequence and annotation generated from a culture of DSM 17069T. The 4,247,724 bp containing genome sequence encodes 4,194 protein-coding genes and 57 RNA genes. In addition to the presence of four plasmids, genome analysis revealed the presence of genes associated with host colonization, DMSP utilization, cytotoxins, and quorum sensing that could play a role in the interrelationship of R. mucosus with the dinoflagellate A. ostenfeldii and other marine organisms. Furthermore, the genome encodes genes associated with mixotrophic growth, where both reduced inorganic compounds for lithotrophic growth and a photoheterotrophic lifestyle using light as additional energy source could be used.
Citation:
Standards in Genomic Sciences. 2015 Mar 19;10(1):17
Issue Date:
19-Mar-2015
URI:
http://dx.doi.org/10.1186/1944-3277-10-17; http://hdl.handle.net/10033/620846
Type:
Article
Appears in Collections:
publications of the central unit for microscopy (ZEIM)

Full metadata record

DC FieldValue Language
dc.contributor.authorRiedel, Thomasen
dc.contributor.authorSpring, Stefanen
dc.contributor.authorFiebig, Anneen
dc.contributor.authorScheuner, Carmenen
dc.contributor.authorPetersen, Jörnen
dc.contributor.authorGöker, Markusen
dc.contributor.authorKlenk, Hans-Peteren
dc.date.accessioned2017-03-06T11:53:54Z-
dc.date.available2017-03-06T11:53:54Z-
dc.date.issued2015-03-19-
dc.identifier.citationStandards in Genomic Sciences. 2015 Mar 19;10(1):17en
dc.identifier.urihttp://dx.doi.org/10.1186/1944-3277-10-17-
dc.identifier.urihttp://hdl.handle.net/10033/620846-
dc.description.abstractAbstract Roseovarius mucosus Biebl et al. 2005 is a bacteriochlorophyll a-producing representative of the marine Roseobacter group within the alphaproteobacterial family Rhodobacteraceae, which was isolated from the dinoflagellate Alexandrium ostenfeldii. The marine Roseobacter group was found to be abundant in the ocean and plays an important role for global and biogeochemical processes. Here we describe the features of the R. mucosus strain DFL-24T together with its genome sequence and annotation generated from a culture of DSM 17069T. The 4,247,724 bp containing genome sequence encodes 4,194 protein-coding genes and 57 RNA genes. In addition to the presence of four plasmids, genome analysis revealed the presence of genes associated with host colonization, DMSP utilization, cytotoxins, and quorum sensing that could play a role in the interrelationship of R. mucosus with the dinoflagellate A. ostenfeldii and other marine organisms. Furthermore, the genome encodes genes associated with mixotrophic growth, where both reduced inorganic compounds for lithotrophic growth and a photoheterotrophic lifestyle using light as additional energy source could be used.en
dc.titleGenome sequence of the Roseovarius mucosus type strain (DSM 17069T), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii-
dc.typeArticleen
dc.language.rfc3066enen
dc.rights.holderRiedel et al.; licensee BioMed Central.en
dc.date.updated2015-09-04T08:25:30Zen
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